Publications

Tilgner H, Jahanbani F, Gupta I, Collier P, Wei E, Rasmussen M, Snyder M.  2018.  Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome.. Genome Res. 28(2):231-242.

Chu C, Murdock MH, Jing D, Won THyung, Chung H, Kressel AM, Tsaava T, Addorisio ME, Putzel GG, Zhou L et al..  2019.  The microbiota regulate neuronal function and fear extinction learning.. Nature. 574(7779):543-548.

Sadler R, Singh V, Benakis C, Garzetti D, Brea D, Stecher B, Anrather J, Liesz A.  2017.  Microbiota differences between commercial breeders impacts the post-stroke immune response.. Brain Behav Immun. 66:23-30.

Shaaban H, Westfall DA, Mohammad R, Danko D, Bezdan D, Afshinnekoo E, Segata N, Mason CE.  2018.  The Microbe Directory: An annotated, searchable inventory of microbes' characteristics.. Gates Open Res. 2:3.

Imam H, Khan M, Gokhale NS, McIntyre ABR, Kim G-W, Jang JYoung, Kim S-J, Mason CE, Horner SM, Siddiqui A.  2018.  -methyladenosine modification of hepatitis B virus RNA differentially regulates the viral life cycle.. Proc Natl Acad Sci U S A.

O'Hara NB, Reed HJ, Afshinnekoo E, Harvin D, Caplan N, Rosen G, Frye B, Woloszynek S, Ounit R, Levy S et al..  2017.  Metagenomic characterization of ambulances across the USA.. Microbiome. 5(1):125.

Akimova D, Wlodarczyk BJ, Lin Y, M Ross E, Finnell RH, Chen Q, Gross SS.  2017.  Metabolite profiling of whole murine embryos reveals metabolic perturbations associated with maternal valproate-induced neural tube closure defects.. Birth Defects Res. 109(2):106-119.

Ishii M, Iadecola C.  2015.  Metabolic and Non-Cognitive Manifestations of Alzheimer's Disease: The Hypothalamus as Both Culprit and Target of Pathology.. Cell Metab. 22(5):761-76.

Kamel H, Chung CD, Kone GJ, Gupta A, Morris NA, Fink ME, Navi BB.  2018.  Medical Specialties of Clinicians Providing Mechanical Thrombectomy to Patients With Acute Ischemic Stroke in the United States.. JAMA Neurol.

Guiberson NGuy Lewis, Pineda A, Abramov D, Kharel P, Carnazza KE, Wragg RT, Dittman JS, Burré J.  2018.  Mechanism-based rescue of Munc18-1 dysfunction in varied encephalopathies by chemical chaperones.. Nat Commun. 9(1):3986.

Vargas WS, Monohan E, Pandya S, Raj A, Vartanian T, Nguyen TD, Rúa SMHurtado, Gauthier SA.  2015.  Measuring longitudinal myelin water fraction in new multiple sclerosis lesions.. Neuroimage Clin. 9:369-75.

Sudarov A, Zhang X-J, Braunstein L, LoCastro E, Singh S, Taniguchi Y, Raj A, Shi S-H, Moore H, M Ross E.  2017.  Mature Hippocampal Neurons Require LIS1 for Synaptic Integrity: Implications for Cognition.. Biol Psychiatry.

Glusman G, Rose PW, Prlić A, Dougherty J, Duarte JM, Hoffman AS, Barton GJ, Bendixen E, Bergquist T, Bock C et al..  2017.  Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework.. Genome Med. 9(1):113.

Song M, Yang X, Ren X, Maliskova L, Li B, Jones IR, Wang C, Jacob F, Wu K, Traglia M et al..  2019.  Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes.. Nat Genet. 51(8):1252-1262.

Gupta A, Gialdini G, Lerario MP, Baradaran H, Giambrone A, Navi BB, Marshall RS, Iadecola C, Kamel H.  2015.  Magnetic resonance angiography detection of abnormal carotid artery plaque in patients with cryptogenic stroke.. J Am Heart Assoc. 4(6):e002012.

Addy NA, Nunes EJ, Hughley SM, Small KM, Baracz SJ, Haight JL, Rajadhyaksha AM.  2018.  The L-type calcium channel blocker, isradipine, attenuates cue-induced cocaine-seeking by enhancing dopaminergic activity in the ventral tegmental area to nucleus accumbens pathway.. Neuropsychopharmacology.

Kabir ZD, Lee AS, Rajadhyaksha AM.  2016.  L-type Ca2+ channels in mood, cognition and addiction: integrating human and rodent studies with a focus on behavioural endophenotypes.. J Physiol. 594(20):5823-5837.

Cole DC, Chung Y, Gagnidze K, Hajdarovic KH, Rayon-Estrada V, Harjanto D, Bigio B, Gal-Toth J, Milner TA, McEwen BS et al..  2017.  Loss of APOBEC1 RNA-editing function in microglia exacerbates age-related CNS pathophysiology.. Proc Natl Acad Sci U S A. 114(50):13272-13277.

Reznik ME, Merkler AE, Mahta A, Murthy SB, Claassen J, Kamel H.  2017.  Long-term risk of seizures in adult survivors of sepsis.. Neurology. 89(14):1476-1482.

Morris NA, May TL, Motta M, Agarwal S, Kamel H.  2018.  Long-term risk of seizures among cardiac arrest survivors.. Resuscitation. 129:94-96.

Agirre X, Meydan C, Jiang Y, Garate L, Doane AS, Li Z, Verma A, Paiva B, Martín-Subero JI, Elemento O et al..  2019.  Long non-coding RNAs discriminate the stages and gene regulatory states of human humoral immune response.. Nat Commun. 10(1):821.

Thengone DJ, Voss HU, Fridman EA, Schiff ND.  2016.  Local changes in network structure contribute to late communication recovery after severe brain injury.. Sci Transl Med. 8(368):368re5.

Cornacchia D, Zhang C, Zimmer B, Chung SYoung, Fan Y, Soliman MA, Tchieu J, Chambers SM, Shah H, Paull D et al..  2019.  Lipid Deprivation Induces a Stable, Naive-to-Primed Intermediate State of Pluripotency in Human PSCs.. Cell Stem Cell.

McGuire MJ, Ishii M.  2016.  Leptin Dysfunction and Alzheimer's Disease: Evidence from Cellular, Animal, and Human Studies.. Cell Mol Neurobiol. 36(2):203-17.

Che A, Babij R, Iannone AF, Fetcho RN, Ferrer M, Liston C, Fishell G, García NVDe Marco.  2018.  Layer I Interneurons Sharpen Sensory Maps during Neonatal Development.. Neuron. 99(1):98-116.e7.