Publications

Found 638 results
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2023
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Bennett NK, Lee M, Orr AL, Nakamura K.  2023.  Systems-level analyses dissociate genetic regulators of reactive oxygen species and energy production.. bioRxiv.
Schiff ND, Giacino JT, Butson CR, Choi EYoung, Baker JL, O'Sullivan KP, Janson AP, Bergin M, Bronte-Stewart HM, Chua J et al..  2023.  Thalamic deep brain stimulation in traumatic brain injury: a phase 1, randomized feasibility study.. Nat Med.
Schiff ND, Giacino JT, Butson CR, Choi EYoung, Baker JL, O'Sullivan KP, Janson AP, Bergin M, Bronte-Stewart HM, Chua J et al..  2023.  Thalamic deep brain stimulation in traumatic brain injury: a phase 1, randomized feasibility study.. Nat Med.
Schiff ND, Giacino JT, Butson CR, Choi EYoung, Baker JL, O'Sullivan KP, Janson AP, Bergin M, Bronte-Stewart HM, Chua J et al..  2023.  Thalamic deep brain stimulation in traumatic brain injury: a phase 1, randomized feasibility study.. Nat Med.
Schiff ND, Giacino JT, Butson CR, Choi EYoung, Baker JL, O'Sullivan KP, Janson AP, Bergin M, Bronte-Stewart HM, Chua J et al..  2023.  Thalamic deep brain stimulation in traumatic brain injury: a phase 1, randomized feasibility study.. Nat Med.
Nair RSathish, Kumar S, Das S, Singh SKumar, Srivastava P, Sondarva G, Rao A, Sinha SC, Xiong R, Bloem L et al..  2023.  TrkA expression directs the anti-neoplastic activity of MLK3 inhibitors in triple-negative breast cancer.. Oncogene.
Foord C, Hsu J, Jarroux J, Hu W, Belchikov N, Pollard S, He Y, Joglekar A, Tilgner HU.  2023.  The variables on RNA molecules: concert or cacophony? Answers in long-read sequencing. Nat Methods. 20(1):20-24.
Ruiz-Uribe NE, Bracko O, Swallow M, Omurzakov A, Dash S, Uchida H, Xiang D, Haft-Javaherian M, Falkenhain K, Lamont ME et al..  2023.  Vascular oxidative stress causes neutrophil arrest in brain capillaries, leading to decreased cerebral blood flow and contributing to memory impairment in a mouse model of Alzheimer’s disease.. bioRxiv.
Sharma M, Burré J.  2023.  α-Synuclein in synaptic function and dysfunction.. Trends Neurosci. 46(2):153-166.
2022
Allen M, Huang BS, Notaras MJ, Lodhi A, Barrio-Alonso E, Lituma PJ, Wolujewicz P, Witztum J, Longo F, Chen M et al..  2022.  Astrocytes derived from ASD individuals alter behavior and destabilize neuronal activity through aberrant Ca2+ signaling.. Mol Psychiatry.
Bodien YG, Katz DI, Schiff ND, Giacino JT.  2022.  Behavioral Assessment of Patients with Disorders of Consciousness.. Semin Neurol. 42(3):249-258.
Bodien YG, Katz D, Schiff N, Giacino JT.  2022.  Behavioral Assessment of Patients with Disorders of Consciousness.. Semin Neurol.
Burré J, Sharma M.  2022.  Cellular And Small Animal Models Of Neurodegenerative Diseases.. J Vis Exp. (186)
Suslova TA, Vavilov MN, Belyaeva SV, Evdokimov AV, Stashkevich DS, Galkin A, Kofiadi IA.  2022.  Distribution of HLA-A, -B, -C, -DRB1, -DQB1, -DPB1 allele frequencies in patients with COVID-19 bilateral pneumonia in Russians, living in the Chelyabinsk region (Russia).. Hum Immunol.
Chora AFerreira, Pedroso D, Kyriakou E, Pejanovic N, Colaço H, Gozzelino R, Barros A, Willmann K, Velho T, Moita CF et al..  2022.  DNA damage independent inhibition of NF-κB transcription by anthracyclines.. Elife. 11
Chora AFerreira, Pedroso D, Kyriakou E, Pejanovic N, Colaço H, Gozzelino R, Barros A, Willmann K, Velho T, Moita CF et al..  2022.  DNA damage independent inhibition of NF-κB transcription by anthracyclines.. Elife. 11
Curley WH, Bodien YG, Zhou DW, Conte MM, Foulkes AS, Giacino JT, Victor JD, Schiff ND, Edlow BL.  2022.  Electrophysiological correlates of thalamocortical function in acute severe traumatic brain injury.. Cortex. 152:136-152.
Almey A, Milner TA, Brake WG.  2022.  Estrogen receptors observed at extranuclear neuronal sites and in glia in the nucleus accumbens core and shell of the female rat: Evidence for localization to catecholaminergic and GABAergic neurons.. J Comp Neurol.
Dong Q, Gentry NW, McMahon T, Yamazaki M, Benitez-Rivera L, Wang T, Gan L, Ptáček L, Fu Y-H.  2022.  Familial natural short sleep mutations reduce Alzheimer pathology in mice.. iScience. 25(4):103964.