Feil Family Brain & Mind Research Institute
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2023
Crane-Smith Z, De Castro SCP, Nikolopoulou E, Wolujewicz P, Smedley D, Lei Y, Mather E, Santos C, Hopkinson M, Pitsillides AA et al..  2023.  A non-coding insertional mutation of Grhl2 causes gene over-expression and multiple structural anomalies including cleft palate, spina bifida and encephalocele.. Hum Mol Genet. 32(17):2681-2692.
Dhawka L, Palfini V, Hambright E, Blanco I, Poon C, Kahl A, Resch U, Bhawal R, Benakis C, Balachandran V et al..  2023.  Post-ischemic ubiquitination at the postsynaptic density reversibly influences the activity of ischemia-relevant kinases.. bioRxiv.
Dhawka L, Palfini V, Hambright E, Blanco I, Poon C, Kahl A, Resch U, Bhawal R, Benakis C, Balachandran V et al..  2023.  Post-ischemic ubiquitination at the postsynaptic density reversibly influences the activity of ischemia-relevant kinases.. bioRxiv.
Gelderblom M, Koch S, Strecker J-K, Jørgensen C, Garcia-Bonilla L, Ludewig P, Schädlich ISophie, Piepke M, Degenhardt K, Bernreuther C et al..  2023.  A preclinical randomized controlled multi-centre trial of anti-interleukin-17A treatment for acute ischaemic stroke.. Brain Commun. 5(2):fcad090.
Gelderblom M, Koch S, Strecker J-K, Jørgensen C, Garcia-Bonilla L, Ludewig P, Schädlich ISophie, Piepke M, Degenhardt K, Bernreuther C et al..  2023.  A preclinical randomized controlled multi-centre trial of anti-interleukin-17A treatment for acute ischaemic stroke.. Brain Commun. 5(2):fcad090.
Cakir Z, Lord SJ, Zhou Y, Jang GM, Polacco BJ, Eckhardt M, Jimenez-Morales D, Newton BW, Orr AL, Johnson JR et al..  2023.  Quantitative proteomic analysis reveals apoE4-dependent phosphorylation of the actin-regulating protein VASP.. Mol Cell Proteomics. :100541.
Larivière D, Abueg L, Brajuka N, Gallardo-Alba C, Grüning B, Ko BJune, Ostrovsky A, Palmada-Flores M, Pickett BD, Rabbani K et al..  2023.  Scalable, accessible, and reproducible reference genome assembly and evaluation in Galaxy.. bioRxiv.
Larivière D, Abueg L, Brajuka N, Gallardo-Alba C, Grüning B, Ko BJune, Ostrovsky A, Palmada-Flores M, Pickett BD, Rabbani K et al..  2023.  Scalable, accessible, and reproducible reference genome assembly and evaluation in Galaxy.. bioRxiv.
Larivière D, Abueg L, Brajuka N, Gallardo-Alba C, Grüning B, Ko BJune, Ostrovsky A, Palmada-Flores M, Pickett BD, Rabbani K et al..  2023.  Scalable, accessible, and reproducible reference genome assembly and evaluation in Galaxy.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2023.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.
Foord C, Hsu J, Jarroux J, Hu W, Belchikov N, Pollard S, He Y, Joglekar A, Tilgner HU.  2023.  The variables on RNA molecules: concert or cacophony? Answers in long-read sequencing. Nat Methods. 20(1):20-24.
Ruiz-Uribe NE, Bracko O, Swallow M, Omurzakov A, Dash S, Uchida H, Xiang D, Haft-Javaherian M, Falkenhain K, Lamont ME et al..  2023.  Vascular oxidative stress causes neutrophil arrest in brain capillaries, leading to decreased cerebral blood flow and contributing to memory impairment in a mouse model of Alzheimer’s disease.. bioRxiv.
2022
Průchová P, Gotvaldová K, Smolková K, Alán L, Holendová B, Tauber J, Galkin A, Ježek P, Jabůrek M.  2022.  Antioxidant Role and Cardiolipin Remodeling by Redox-Activated Mitochondrial Ca2+-Independent Phospholipase A2γ in the Brain.. Antioxidants (Basel). 11(2)
Parikh NS, Kamel H, Zhang C, Kumar S, Rosenblatt R, Spincemaille P, Gupta A, Cohen DE, de Leon MJ, Gottesman RF et al..  2022.  Association between liver fibrosis and incident dementia in the UK Biobank study.. Eur J Neurol.
Parikh NS, Kamel H, Zhang C, Gupta A, Cohen DE, de Leon MJ, Gottesman RF, Iadecola C.  2022.  Association of liver fibrosis with cognitive test performance and brain imaging parameters in the UK Biobank study.. Alzheimers Dement.
Chora AFerreira, Pedroso D, Kyriakou E, Pejanovic N, Colaço H, Gozzelino R, Barros A, Willmann K, Velho T, Moita CF et al..  2022.  DNA damage independent inhibition of NF-κB transcription by anthracyclines.. Elife. 11
Chora AFerreira, Pedroso D, Kyriakou E, Pejanovic N, Colaço H, Gozzelino R, Barros A, Willmann K, Velho T, Moita CF et al..  2022.  DNA damage independent inhibition of NF-κB transcription by anthracyclines.. Elife. 11
Chora AFerreira, Pedroso D, Kyriakou E, Pejanovic N, Colaço H, Gozzelino R, Barros A, Willmann K, Velho T, Moita CF et al..  2022.  DNA damage independent inhibition of NF-κB transcription by anthracyclines.. Elife. 11
Lucaci AG, Notaras MJ, Pond SLKosakovs, Colak D.  2022.  The evolution of BDNF is defined by strict purifying selection and prodomain spatial coevolution, but what does it mean for human brain disease? Transl Psychiatry. 12(1):258.
Dong Q, Gentry NW, McMahon T, Yamazaki M, Benitez-Rivera L, Wang T, Gan L, Ptáček L, Fu Y-H.  2022.  Familial natural short sleep mutations reduce Alzheimer pathology in mice.. iScience. 25(4):103964.
A Banday R, Stanifer ML, Florez-Vargas O, Onabajo OO, Papenberg BW, Zahoor MA, Mirabello L, Ring TJ, Lee C-H, Albert PS et al..  2022.  Genetic regulation of OAS1 nonsense-mediated decay underlies association with COVID-19 hospitalization in patients of European and African ancestries.. Nat Genet.