Feil Family Brain & Mind Research Institute

Publications

Found 374 results

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Journal Article

Moda-Sava RN, Murdock MH, Parekh PK, Fetcho RN, Huang BS, Huynh TN, Witztum J, Shaver DC, Rosenthal DL, Alway EJ et al.. 2019. Sustained rescue of prefrontal circuit dysfunction by antidepressant-induced spine formation.. Science. 364(6436)

Moda-Sava RN, Murdock MH, Parekh PK, Fetcho RN, Huang BS, Huynh TN, Witztum J, Shaver DC, Rosenthal DL, Alway EJ et al.. 2019. Sustained rescue of prefrontal circuit dysfunction by antidepressant-induced spine formation.. Science. 364(6436)

Gao V, Chlebowicz J, Gaskin K, Briano JA, Komer LE, Pineda A, Jhalani S, Ahmad S, Uwaifo E, Black LS et al.. 2025. Synaptic vesicle-omics in mice captures signatures of aging and synucleinopathy.. Nat Commun. 16(1):4079.

Tapias V, Hu X, Luk KC, Sanders LH, Lee VM, J Greenamyre T. 2017. Synthetic alpha-synuclein fibrils cause mitochondrial impairment and selective dopamine neurodegeneration in part via iNOS-mediated nitric oxide production.. Cell Mol Life Sci. 74(15):2851-2874.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2023. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2023. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2024. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. Nat Methods. 21(7):1349-1363.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2024. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. Nat Methods. 21(7):1349-1363.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2024. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. Nat Methods. 21(7):1349-1363.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2023. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2023. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2023. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. bioRxiv.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2024. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. Nat Methods. 21(7):1349-1363.

Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al.. 2024. Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. Nat Methods. 21(7):1349-1363.

Tan L, Duan X, Mutyala P, Zhou T, Amin S, Zhang T, Herbst B, Askan G, Itkin T, Xiang Z et al.. 2023. A Targetable Pathway to Eliminate TRA-1-60+/TRA-1-81+ Chemoresistant Cancer Cells.. J Mol Cell Biol.

Gong B, Li D, Łabaj PP, Pan B, Novoradovskaya N, Thierry-Mieg D, Thierry-Mieg J, Chen G, Lucas ABergstrom, LoCoco JS et al.. 2024. Targeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing.. Sci Data. 11(1):892.

Ke YD, van Hummel A, Au C, Chan G, Lee WSiang, van der Hoven J, Przybyla M, Deng Y, Sabale M, Morey N et al.. 2024. Targeting 14-3-3θ-mediated TDP-43 pathology in amyotrophic lateral sclerosis and frontotemporal dementia mice.. Neuron.

Mathew G, Hannan A, Hertzler-Schaefer K, Wang F, Feng G-S, Zhong J, Zhao JJ, Downward J, Zhang X. 2016. Targeting of Ras-mediated FGF signaling suppresses Pten-deficient skin tumor.. Proc Natl Acad Sci U S A. 113(46):13156-13161.

Mathew G, Hannan A, Hertzler-Schaefer K, Wang F, Feng G-S, Zhong J, Zhao JJ, Downward J, Zhang X. 2016. Targeting of Ras-mediated FGF signaling suppresses Pten-deficient skin tumor.. Proc Natl Acad Sci U S A. 113(46):13156-13161.

Park L, Hochrainer K, Hattori Y, Ahn SJi, Anfray A, Wang G, Uekawa K, Seo J, Palfini V, Blanco I et al.. 2020. Tau induces PSD95-neuronal NOS uncoupling and neurovascular dysfunction independent of neurodegeneration.. Nat Neurosci. 23(9):1079-1089.

Park L, Hochrainer K, Hattori Y, Ahn SJi, Anfray A, Wang G, Uekawa K, Seo J, Palfini V, Blanco I et al.. 2020. Tau induces PSD95-neuronal NOS uncoupling and neurovascular dysfunction independent of neurodegeneration.. Nat Neurosci. 23(9):1079-1089.

Tracy TE, Madero-Pérez J, Swaney DL, Chang TS, Moritz M, Konrad C, Ward ME, Stevenson E, Hüttenhain R, Kauwe G et al.. 2022. Tau interactome maps synaptic and mitochondrial processes associated with neurodegeneration.. Cell. 185(4):712-728.e14.

Hu X, Li X, Zhao M, Gottesdiener A, Luo W, Paul S. 2014. Tau pathogenesis is promoted by Aβ1-42 but not Aβ1-40.. Mol Neurodegener. 9:52.

Watanabe M, Buth JE, Haney JR, Vishlaghi N, Turcios F, Elahi LS, Gu W, Pearson CA, Kurdian A, Baliaouri NV et al.. 2022. TGFβ superfamily signaling regulates the state of human stem cell pluripotency and capacity to create well-structured telencephalic organoids.. Stem Cell Reports. 17(10):2220-2238.

Schiff ND, Giacino JT, Butson CR, Choi EYoung, Baker JL, O'Sullivan KP, Janson AP, Bergin M, Bronte-Stewart HM, Chua J et al.. 2023. Thalamic deep brain stimulation in traumatic brain injury: a phase 1, randomized feasibility study.. Nat Med.