Publications

Found 210 results
Author Title Type [ Year(Desc)]
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2024
Pardo-Palacios FJ, Wang D, Reese F, Diekhans M, Carbonell-Sala S, Williams B, Loveland JE, De María M, Adams MS, Balderrama-Gutierrez G et al..  2024.  Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.. Nat Methods. 21(7):1349-1363.
Gong B, Li D, Łabaj PP, Pan B, Novoradovskaya N, Thierry-Mieg D, Thierry-Mieg J, Chen G, Lucas ABergstrom, LoCoco JS et al..  2024.  Targeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing.. Sci Data. 11(1):892.
Lopez-Lee C, Kodama L, Fan L, Zhu D, Zhu J, Wong MYing, Ye P, Norman K, Foxe NR, Ijaz L et al..  2024.  Tlr7 drives sex differences in age- and Alzheimer's disease-related demyelination.. Science. 386(6725):eadk7844.
Schiff ND.  2024.  Toward an interventional science of recovery after coma.. Neuron. 112(10):1595-1610.
Qu W, Lam M, McInvale JJ, Mares JA, Kwon S, Humala N, Mahajan A, Nguyen T, Jakubiak KA, Mun J-Y et al..  2024.  Xenografted human iPSC-derived neurons with the familial Alzheimer's disease APPV717I mutation reveal dysregulated transcriptome signatures linked to synaptic function and implicate LINGO2 as a disease signaling mediator.. Acta Neuropathol. 147(1):107.
2025
Larrea D, Tamucci KA, Kabra K, Velasco KR, Yun TD, Pera M, Montesinos J, Agrawal RR, Paradas C, Smerdon JW et al..  2025.  Altered mitochondria-associated ER membrane (MAM) function shifts mitochondrial metabolism in amyotrophic lateral sclerosis (ALS).. Nat Commun. 16(1):379.
Martinez-Meza S, Premeaux TA, Cirigliano SM, Friday CM, Michael S, Mediouni S, Valente ST, Ndhlovu LC, Fine HA, O'Brien RLFurler et al..  2025.  Antiretroviral drug therapy does not reduce neuroinflammation in an HIV-1 infection brain organoid model.. J Neuroinflammation. 22(1):66.
Andres W, Bruce S, Merkler AEliot, Iadecola C, de Leon MJ, Chiang GC, Kamel H, Zhang C, Murthy SB.  2025.  Association Between Cerebral Amyloid Angiopathy and Nontraumatic Subdural Hemorrhage.. Neurology. 104(10):e213614.
Zheng H, Feng Y, Tang J, Yu F, Wang Z, Xu J, Hai C, Jiang M, Cheng Y, Shao Z et al..  2025.  Astrocyte-secreted cues promote neural maturation and augment activity in human forebrain organoids.. Nat Commun. 16(1):2845.
Liao S-C, Kano K, Phanse S, Nguyen M, Margolis E, Fu YH, Meng JX, Moutaoufik MTaha, Chatterton Z, Saccon T et al..  2025.  CHCHD2 mutant mice link mitochondrial deficits to PD pathophysiology.. Sci Adv. 11(46):eadu0726.
Louviot S, Radanovic A, Martin I, Patchell A, Alkhoury L, Scanavini G, Schiff ND, Hill NJeremy, Shah SA.  2025.  Cortical oscillatory dynamics underlying response speed: insights from high-density EEG and the attention network test.. Cereb Cortex. 35(12)
Bellat V, Glaser A, Gong H, Gill A, Lee YJae, Cifani P, Stokol T, Vahdat L, Law B.  2025.  Customized Nanofibers with Lung-Targeting and -Retention Properties for Treating Isolated Triple-Negative Breast Cancer Pulmonary Metastases.. ACS Nano. 19(33):29994-30009.
Chen H, Fan L, Guo Q, Wong MYing, Zhu J, Foxe N, Wang W, Nessim A, Carling G, Liu B et al..  2025.  DAP12 deletion reduces neuronal SLIT2 and demyelination and enhances brain resilience in female tauopathy mice.. Mol Neurodegener. 20(1):124.
Patra S, Namballa HK, Gudipally AR, Xie L, Xie L, Harding WW.  2025.  Discovery of a selective α2C-AR scaffold from a molecular hybridization approach.. Bioorg Med Chem. 131:118424.
Stankovic I, Smit P, Cross J, Rai A, Wolujewicz P, Greening D, Colak D.  2025.  Extracellular vesicle profiling reveals novel autism signatures in patient-derived forebrain organoids.. Transl Psychiatry. 15(1):393.
Alarcón-Espósito J, Nagiri RKumar, Wang S, Larson C, Carvallo-Torres L, Singh VKumar, J Glickman F, Gan L, Sinha SC.  2025.  High-Throughput Screening and Initial SAR Studies Identify a Novel Submicromolar Potent Human cGAS Inhibitor.. ACS Chem Biol. 20(12):2886-2896.
Wang S, Qi C, Rajpurohit C, Ghosh B, Xiong W, Wang B, Qi Y, Hwang SHee, Hammock BD, Li H et al..  2025.  Inhibition of soluble epoxide hydrolase confers neuroprotection and restores microglial homeostasis in a tauopathy mouse model.. Mol Neurodegener. 20(1):44.
Mottaqi M, Zhang P, Xie L.  2025.  Integrating explainable artificial intelligence with multiomics systems biology and electronic health record data mining for personalized drug repurposing in Alzheimer's disease.. Brief Bioinform. 26(6)
Woo E, Tasnim F, Kawamata H, Manfredi G, Konrad C.  2025.  Investigation of mitochondrial phenotypes in motor neurons derived by direct conversion of fibroblasts from familial ALS subjects.. Cell Death Dis. 17(1):51.
Zhou H, Balint D, Shi Q, Vartanian T, Kriegel MA, Brito I.  2025.  Lupus and inflammatory bowel disease share a common set of microbiome features distinct from other autoimmune disorders.. Ann Rheum Dis. 84(1):93-105.
Barnett D, Zimmer TS, Booraem C, Palaguachi F, Meadows SM, Xiao H, Wong MYing, Luo W, Gan L, Chouchani ET et al..  2025.  Mitochondrial complex III-derived ROS amplify immunometabolic changes in astrocytes and promote dementia pathology.. Nat Metab. 7(11):2300-2323.
Pinskaya M, Jarroux J, Cipolla R, Morillon A.  2025.  Nascent and Mature RNA Profiling by Subcellular Fractionation in Human Cells.. Methods Mol Biol. 2863:283-296.
Celii B, Papadopoulos S, Ding Z, Fahey PG, Wang E, Papadopoulos C, Kunin AB, Patel S, J Bae A, Bodor AL et al..  2025.  NEURD offers automated proofreading and feature extraction for connectomics.. Nature. 640(8058):487-496.
Zhou C, Hardin EJ, Zimmer TS, Jackvony S, Barnett D, Khobrekar N, Giacomelli E, Studer L, Orr AL, Orr AG.  2025.  Neuroimmune signaling mediates astrocytic nucleocytoplasmic disruptions and stress granule formation associated with TDP-43 pathology.. Neurobiol Dis. 211:106939.
Bruce SS, Pawar A, Liao V, Merkler AE, Liberman AL, Navi BB, Iadecola C, Kamel H, Zhang C, Murthy SB.  2025.  Nontraumatic Intracranial Hemorrhage and Risk of Incident Dementia in US Medicare Beneficiaries.. Stroke. 56(4):908-914.