Publications

Found 602 results
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2025
Celii B, Papadopoulos S, Ding Z, Fahey PG, Wang E, Papadopoulos C, Kunin AB, Patel S, J Bae A, Bodor AL et al..  2025.  NEURD offers automated proofreading and feature extraction for connectomics.. Nature. 640(8058):487-496.
Celii B, Papadopoulos S, Ding Z, Fahey PG, Wang E, Papadopoulos C, Kunin AB, Patel S, J Bae A, Bodor AL et al..  2025.  NEURD offers automated proofreading and feature extraction for connectomics.. Nature. 640(8058):487-496.
Celii B, Papadopoulos S, Ding Z, Fahey PG, Wang E, Papadopoulos C, Kunin AB, Patel S, J Bae A, Bodor AL et al..  2025.  NEURD offers automated proofreading and feature extraction for connectomics.. Nature. 640(8058):487-496.
Zhou C, Hardin EJ, Zimmer TS, Jackvony S, Barnett D, Khobrekar N, Giacomelli E, Studer L, Orr AL, Orr AG.  2025.  Neuroimmune signaling mediates astrocytic nucleocytoplasmic disruptions and stress granule formation associated with TDP-43 pathology.. Neurobiol Dis. 211:106939.
Bruce SS, Pawar A, Liao V, Merkler AE, Liberman AL, Navi BB, Iadecola C, Kamel H, Zhang C, Murthy SB.  2025.  Nontraumatic Intracranial Hemorrhage and Risk of Incident Dementia in US Medicare Beneficiaries.. Stroke. 56(4):908-914.
Clelland CDudley, Fan L, Saloner R, Etchegaray JIker, Altobelli CRichard, Salomonsson S, Maltos AM, Sachdev A, Zhu J, Lee S-I et al..  2025.  Opposing role of phagocytic receptors MERTK and AXL in Progranulin deficient FTD.. Commun Biol. 8(1):971.
Elabbady L, Seshamani S, Mu S, Mahalingam G, Schneider-Mizell CM, Bodor AL, J Bae A, Brittain D, Buchanan JA, Bumbarger DJ et al..  2025.  Perisomatic ultrastructure efficiently classifies cells in mouse cortex.. Nature. 640(8058):478-486.
Elabbady L, Seshamani S, Mu S, Mahalingam G, Schneider-Mizell CM, Bodor AL, J Bae A, Brittain D, Buchanan JA, Bumbarger DJ et al..  2025.  Perisomatic ultrastructure efficiently classifies cells in mouse cortex.. Nature. 640(8058):478-486.
Elabbady L, Seshamani S, Mu S, Mahalingam G, Schneider-Mizell CM, Bodor AL, J Bae A, Brittain D, Buchanan JA, Bumbarger DJ et al..  2025.  Perisomatic ultrastructure efficiently classifies cells in mouse cortex.. Nature. 640(8058):478-486.
Bruce SS, Zhang C, Liberman AL, Merkler AE, Navi BB, Chiang GC, Iadecola C, Kamel H, Murthy SB.  2025.  Prevalence of Cerebral Amyloid Angiopathy and Associated Risk of Subsequent Ischemic and Hemorrhagic Stroke and Mortality in a Nationwide Cohort.. Ann Neurol. 98(2):249-257.
Kohno S, Okahashi N, Wan Y, Yu H, Takegami Y, Linn P, Nagatani N, Kitajima S, Kawada T, Matsuda F et al..  2025.  RB1 controls differentiation through positive regulation of phosphoglycerate mutases.. Cell Death Dis. 16(1):559.
Kohno S, Okahashi N, Wan Y, Yu H, Takegami Y, Linn P, Nagatani N, Kitajima S, Kawada T, Matsuda F et al..  2025.  RB1 controls differentiation through positive regulation of phosphoglycerate mutases.. Cell Death Dis. 16(1):559.
Kohno S, Okahashi N, Wan Y, Yu H, Takegami Y, Linn P, Nagatani N, Kitajima S, Kawada T, Matsuda F et al..  2025.  RB1 controls differentiation through positive regulation of phosphoglycerate mutases.. Cell Death Dis. 16(1):559.
Lee J, Kang R, Park S, Saliu IO, Son M, Voorhees JR, Dimitry JM, Quillin EI, Woodie LN, Lananna BV et al..  2025.  REV-ERBα regulates brain NAD+ levels and tauopathy via an NFIL3-CD38 axis.. Nat Aging.
Mossa A, Dierdorff L, Lukin J, Garcia-Forn M, Wang W, Mamashli F, Park Y, Fiorenzani C, Akpinar Z, Kamps J et al..  2025.  Sex-specific perturbations of neuronal development caused by mutations in the autism risk gene DDX3X.. Nat Commun. 16(1):4512.
Foord C, Prjibelski AD, Hu W, Michielsen L, Vandelli A, Narykov O, Evans B, Hsu J, Belchikov N, Jarroux J et al..  2025.  A spatial long-read approach at near-single-cell resolution reveals developmental regulation of splicing and polyadenylation sites in distinct cortical layers and cell types.. Nat Commun. 16(1):8093.
Gao V, Chlebowicz J, Gaskin K, Briano JA, Komer LE, Pineda A, Jhalani S, Ahmad S, Uwaifo E, Black LS et al..  2025.  Synaptic vesicle-omics in mice captures signatures of aging and synucleinopathy.. Nat Commun. 16(1):4079.
Breves SL, Di Giammartino DCampigli, Nicholson J, Cirigliano S, Mahmood SRaza, Lee UJin, Martinez-Fundichely A, Jungverdorben J, Singhania R, Rajkumar S et al..  2025.  Three-dimensional regulatory hubs support oncogenic programs in glioblastoma.. Mol Cell. 85(7):1330-1348.e6.
Breves SL, Di Giammartino DCampigli, Nicholson J, Cirigliano S, Mahmood SRaza, Lee UJin, Martinez-Fundichely A, Jungverdorben J, Singhania R, Rajkumar S et al..  2025.  Three-dimensional regulatory hubs support oncogenic programs in glioblastoma.. Mol Cell. 85(7):1330-1348.e6.
Vargas-Ortiz J, Lin L, Martinez VK, Liu R-J, Babij R, Duan ZRan S, Wacks S, Sun L, Wang A, Khan S et al..  2025.  Translaminar synchronous neuronal activity is required for columnar synaptic strengthening in the mouse neocortex.. Nat Commun. 16(1):1296.
Hes C, Tomlinson AJ, Michielsen L, Murdoch HJ, Soltani F, Kokoeva MV, Sabatini PV.  2025.  A unified rodent atlas reveals the cellular complexity and evolutionary divergence of the dorsal vagal complex.. Elife. 14
Weis MA, Papadopoulos S, Hansel L, Lüddecke T, Celii B, Fahey PG, Wang EY, J Bae A, Bodor AL, Brittain D et al..  2025.  An unsupervised map of excitatory neuron dendritic morphology in the mouse visual cortex.. Nat Commun. 16(1):3361.
Weis MA, Papadopoulos S, Hansel L, Lüddecke T, Celii B, Fahey PG, Wang EY, J Bae A, Bodor AL, Brittain D et al..  2025.  An unsupervised map of excitatory neuron dendritic morphology in the mouse visual cortex.. Nat Commun. 16(1):3361.
Weis MA, Papadopoulos S, Hansel L, Lüddecke T, Celii B, Fahey PG, Wang EY, J Bae A, Bodor AL, Brittain D et al..  2025.  An unsupervised map of excitatory neuron dendritic morphology in the mouse visual cortex.. Nat Commun. 16(1):3361.
Cheng H, Miller D, Southwell N, Porcari P, Fischer JL, Taylor I, J Salbaum M, Kappen C, Hu F, Yang C et al..  2025.  Untargeted pixel-by-pixel metabolite ratio imaging as a novel tool for biomedical discovery in mass spectrometry imaging.. Elife. 13