Publications

Found 10 results
Author Title [ Type(Desc)] Year
Filters: Author is Joglekar, Anoushka  [Clear All Filters]
Journal Article
Prjibelski AD, Mikheenko A, Joglekar A, Smetanin A, Jarroux J, Lapidus AL, Tilgner HU.  2023.  Accurate isoform discovery with IsoQuant using long reads.. Nat Biotechnol.
Joglekar A, Foord C, Jarroux J, Pollard S, Tilgner HU.  2023.  From words to complete phrases: insight into single-cell isoforms using short and long reads.. Transcription. :1-13.
Hardwick SA, Joglekar A, Flicek P, Frankish A, Tilgner HU.  2019.  Getting the Entire Message: Progress in Isoform Sequencing.. Front Genet. 10:709.
Stein AN, Joglekar A, Poon C-L, Tilgner HU.  2022.  ScisorWiz: Visualizing Differential Isoform Expression in Single-Cell Long-Read Data.. Bioinformatics.
Mikheenko A, Prjibelski AD, Joglekar A, Tilgner HU.  2022.  Sequencing of individual barcoded cDNAs using Pacific Biosciences and Oxford Nanopore Technologies reveals platform-specific error patterns.. Genome Res. 32(4):726-737.
Gupta I, Collier PG, Haase B, Mahfouz A, Joglekar A, Floyd T, Koopmans F, Barres B, Smit AB, Sloan SA et al..  2018.  Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells.. Nat Biotechnol.
Joglekar A, Hu W, Zhang B, Narykov O, Diekhans M, Balacco J, Ndhlovu LC, Milner TA, Fedrigo O, Jarvis ED et al..  2023.  Single-cell long-read mRNA isoform regulation is pervasive across mammalian brain regions, cell types, and development.. bioRxiv.
Joglekar A, Hu W, Zhang B, Narykov O, Diekhans M, Marrocco J, Balacco J, Ndhlovu LC, Milner TA, Fedrigo O et al..  2024.  Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain.. Nat Neurosci.
Hardwick SA, Hu W, Joglekar A, Fan L, Collier PG, Foord C, Balacco J, Lanjewar S, Sampson MMcGuirk, Koopmans F et al..  2022.  Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue.. Nat Biotechnol.
Foord C, Hsu J, Jarroux J, Hu W, Belchikov N, Pollard S, He Y, Joglekar A, Tilgner HU.  2023.  The variables on RNA molecules: concert or cacophony? Answers in long-read sequencing. Nat Methods. 20(1):20-24.