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Found 33 results
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Mason, Christopher E
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Journal Article
Gong B
,
Li D
,
Łabaj PP
,
Pan B
,
Novoradovskaya N
,
Thierry-Mieg D
,
Thierry-Mieg J
,
Chen G
,
Lucas ABergstrom
,
LoCoco JS
et al.
. 2024.
Targeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing.
.
Sci Data. 11(1):892.
Aguiar-Pulido V
,
Wolujewicz P
,
Martinez-Fundichely A
,
Elhaik E
,
Thareja G
,
Aleem AAbdel
,
Chalhoub N
,
Cuykendall T
,
Al-Zamer J
,
Lei Y
et al.
. 2021.
Systems biology analysis of human genomes points to key pathways conferring spina bifida risk.
.
Proc Natl Acad Sci U S A. 118(51)
McIntyre ABR
,
Alexander N
,
Grigorev K
,
Bezdan D
,
Sichtig H
,
Chiu CY
,
Mason CE
. 2019.
Single-molecule sequencing detection of N6-methyladenine in microbial reference materials.
.
Nat Commun. 10(1):579.
Jain D
,
Meydan C
,
Lange J
,
Bouuaert CClaeys
,
Lailler N
,
Mason CE
,
Anderson KV
,
Keeney S
. 2017.
rahu is a mutant allele of Dnmt3c, encoding a DNA methyltransferase homolog required for meiosis and transposon repression in the mouse male germline.
.
PLoS Genet. 13(8):e1006964.
Garrett-Bakelman FE
,
Darshi M
,
Green SJ
,
Gur RC
,
Lin L
,
Macias BR
,
McKenna MJ
,
Meydan C
,
Mishra T
,
Nasrini J
et al.
. 2019.
The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight.
.
Science. 364(6436)
McIntyre ABR
,
Rizzardi L
,
Yu AM
,
Alexander N
,
Rosen GL
,
Botkin DJ
,
Stahl SE
,
John KK
,
Castro-Wallace SL
,
McGrath K
et al.
. 2016.
Nanopore sequencing in microgravity.
.
NPJ Microgravity. 2:16035.
Castro-Wallace SL
,
Chiu CY
,
John KK
,
Stahl SE
,
Rubins KH
,
McIntyre ABR
,
Dworkin JP
,
Lupisella ML
,
Smith DJ
,
Botkin DJ
et al.
. 2017.
Nanopore DNA Sequencing and Genome Assembly on the International Space Station.
.
Sci Rep. 7(1):18022.
Vu LP
,
Pickering BF
,
Cheng Y
,
Zaccara S
,
Nguyen D
,
Minuesa G
,
Chou T
,
Chow A
,
Saletore Y
,
MacKay M
et al.
. 2017.
The N6-methyladenosine (m6A)-forming enzyme METTL3 controls myeloid differentiation of normal hematopoietic and leukemia cells.
.
Nat Med. 23(11):1369-1376.
Singh NK
,
Bezdan D
,
Sielaff AChecinska
,
Wheeler K
,
Mason CE
,
Venkateswaran K
. 2018.
Multi-drug resistant Enterobacter bugandensis species isolated from the International Space Station and comparative genomic analyses with human pathogenic strains.
.
BMC Microbiol. 18(1):175.
Shaaban H
,
Westfall DA
,
Mohammad R
,
Danko D
,
Bezdan D
,
Afshinnekoo E
,
Segata N
,
Mason CE
. 2018.
The Microbe Directory: An annotated, searchable inventory of microbes' characteristics.
.
Gates Open Res. 2:3.
Imam H
,
Khan M
,
Gokhale NS
,
McIntyre ABR
,
Kim G-W
,
Jang JYoung
,
Kim S-J
,
Mason CE
,
Horner SM
,
Siddiqui A
. 2018.
-methyladenosine modification of hepatitis B virus RNA differentially regulates the viral life cycle.
.
Proc Natl Acad Sci U S A.
O'Hara NB
,
Reed HJ
,
Afshinnekoo E
,
Harvin D
,
Caplan N
,
Rosen G
,
Frye B
,
Woloszynek S
,
Ounit R
,
Levy S
et al.
. 2017.
Metagenomic characterization of ambulances across the USA.
.
Microbiome. 5(1):125.
Agirre X
,
Meydan C
,
Jiang Y
,
Garate L
,
Doane AS
,
Li Z
,
Verma A
,
Paiva B
,
Martín-Subero JI
,
Elemento O
et al.
. 2019.
Long non-coding RNAs discriminate the stages and gene regulatory states of human humoral immune response.
.
Nat Commun. 10(1):821.
Tessler M
,
Neumann JS
,
Afshinnekoo E
,
Pineda M
,
Hersch R
,
Velho LFelipe M
,
Segovia BT
,
Lansac-Toha FA
,
Lemke M
,
DeSalle R
et al.
. 2017.
Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing.
.
Sci Rep. 7(1):6589.
Yao Y
,
Norris EH
,
Mason CE
,
Strickland S
. 2016.
Laminin regulates PDGFRβ(+) cell stemness and muscle development.
.
Nat Commun. 7:11415.
Jain D
,
M Puno R
,
Meydan C
,
Lailler N
,
Mason CE
,
Lima CD
,
Anderson KV
,
Keeney S
. 2018.
ketu mutant mice uncover an essential meiotic function for the ancient RNA helicase YTHDC2.
.
Elife. 7
Sudmant PH
,
Rausch T
,
Gardner EJ
,
Handsaker RE
,
Abyzov A
,
Huddleston J
,
Zhang Y
,
Ye K
,
Jun G
,
Fritz MHsi-Yang
et al.
. 2015.
An integrated map of structural variation in 2,504 human genomes.
.
Nature. 526(7571):75-81.
Goldman SL
,
MacKay M
,
Afshinnekoo E
,
Melnick AM
,
Wu S
,
Mason CE
. 2019.
The Impact of Heterogeneity on Single-Cell Sequencing.
.
Front Genet. 10:8.
Afshinnekoo E
,
Ahsanuddin S
,
Mason CE
. 2016.
Globalizing and crowdsourcing biomedical research.
.
Br Med Bull. 120(1):27-33.
M Ross E
,
Mason CE
,
Finnell RH
. 2017.
Genomic approaches to the assessment of human spina bifida risk.
.
Birth Defects Res. 109(2):120-128.
Rosenfeld JA
,
Reeves D
,
Brugler MR
,
Narechania A
,
Simon S
,
Durrett R
,
Foox J
,
Shianna K
,
Schatz MC
,
Gandara J
et al.
. 2016.
Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius.
.
Nat Commun. 7:10164.
Zook JM
,
Catoe D
,
McDaniel J
,
Vang L
,
Spies N
,
Sidow A
,
Weng Z
,
Liu Y
,
Mason CE
,
Alexander N
et al.
. 2016.
Extensive sequencing of seven human genomes to characterize benchmark reference materials.
.
Sci Data. 3:160025.
Ma Y
,
Sannino D
,
Linden JR
,
Haigh S
,
Zhao B
,
Grigg JB
,
Zumbo P
,
Dündar F
,
Butler DJ
,
Profaci CP
et al.
. 2023.
Epsilon toxin-producing Clostridium perfringens colonize the MS gut and epsilon toxin overcomes immune privilege.
.
J Clin Invest.
Goldman SL
,
Hassan C
,
Khunte M
,
Soldatenko A
,
Jong Y
,
Afshinnekoo E
,
Mason CE
. 2019.
Epigenetic Modifications in Acute Myeloid Leukemia: Prognosis, Treatment, and Heterogeneity.
.
Front Genet. 10:133.
Lichinchi G
,
Gao S
,
Saletore Y
,
Gonzalez GMichelle
,
Bansal V
,
Wang Y
,
Mason CE
,
Rana TM
. 2016.
Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells.
.
Nat Microbiol. 1:16011.
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