Feil Family Brain & Mind Research Institute

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Publications

Found 30 results
Author Title [ Type(Asc)] Year
Filters: Author is Mason, Christopher E  [Clear All Filters]
Journal Article
McIntyre ABR, Alexander N, Grigorev K, Bezdan D, Sichtig H, Chiu CY, Mason CE.  2019.  Single-molecule sequencing detection of N6-methyladenine in microbial reference materials.. Nat Commun. 10(1):579.
Jain D, Meydan C, Lange J, Bouuaert CClaeys, Lailler N, Mason CE, Anderson KV, Keeney S.  2017.  rahu is a mutant allele of Dnmt3c, encoding a DNA methyltransferase homolog required for meiosis and transposon repression in the mouse male germline.. PLoS Genet. 13(8):e1006964.
Garrett-Bakelman FE, Darshi M, Green SJ, Gur RC, Lin L, Macias BR, McKenna MJ, Meydan C, Mishra T, Nasrini J et al..  2019.  The NASA Twins Study: A multidimensional analysis of a year-long human spaceflight.. Science. 364(6436)
McIntyre ABR, Rizzardi L, Yu AM, Alexander N, Rosen GL, Botkin DJ, Stahl SE, John KK, Castro-Wallace SL, McGrath K et al..  2016.  Nanopore sequencing in microgravity.. NPJ Microgravity. 2:16035.
Castro-Wallace SL, Chiu CY, John KK, Stahl SE, Rubins KH, McIntyre ABR, Dworkin JP, Lupisella ML, Smith DJ, Botkin DJ et al..  2017.  Nanopore DNA Sequencing and Genome Assembly on the International Space Station.. Sci Rep. 7(1):18022.
Vu LP, Pickering BF, Cheng Y, Zaccara S, Nguyen D, Minuesa G, Chou T, Chow A, Saletore Y, MacKay M et al..  2017.  The N6-methyladenosine (m6A)-forming enzyme METTL3 controls myeloid differentiation of normal hematopoietic and leukemia cells.. Nat Med. 23(11):1369-1376.
Singh NK, Bezdan D, Sielaff AChecinska, Wheeler K, Mason CE, Venkateswaran K.  2018.  Multi-drug resistant Enterobacter bugandensis species isolated from the International Space Station and comparative genomic analyses with human pathogenic strains.. BMC Microbiol. 18(1):175.
Shaaban H, Westfall DA, Mohammad R, Danko D, Bezdan D, Afshinnekoo E, Segata N, Mason CE.  2018.  The Microbe Directory: An annotated, searchable inventory of microbes' characteristics.. Gates Open Res. 2:3.
Imam H, Khan M, Gokhale NS, McIntyre ABR, Kim G-W, Jang JYoung, Kim S-J, Mason CE, Horner SM, Siddiqui A.  2018.  -methyladenosine modification of hepatitis B virus RNA differentially regulates the viral life cycle.. Proc Natl Acad Sci U S A.
O'Hara NB, Reed HJ, Afshinnekoo E, Harvin D, Caplan N, Rosen G, Frye B, Woloszynek S, Ounit R, Levy S et al..  2017.  Metagenomic characterization of ambulances across the USA.. Microbiome. 5(1):125.
Agirre X, Meydan C, Jiang Y, Garate L, Doane AS, Li Z, Verma A, Paiva B, Martín-Subero JI, Elemento O et al..  2019.  Long non-coding RNAs discriminate the stages and gene regulatory states of human humoral immune response.. Nat Commun. 10(1):821.
Tessler M, Neumann JS, Afshinnekoo E, Pineda M, Hersch R, Velho LFelipe M, Segovia BT, Lansac-Toha FA, Lemke M, DeSalle R et al..  2017.  Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing.. Sci Rep. 7(1):6589.
Yao Y, Norris EH, Mason CE, Strickland S.  2016.  Laminin regulates PDGFRβ(+) cell stemness and muscle development.. Nat Commun. 7:11415.
Jain D, M Puno R, Meydan C, Lailler N, Mason CE, Lima CD, Anderson KV, Keeney S.  2018.  ketu mutant mice uncover an essential meiotic function for the ancient RNA helicase YTHDC2.. Elife. 7
Sudmant PH, Rausch T, Gardner EJ, Handsaker RE, Abyzov A, Huddleston J, Zhang Y, Ye K, Jun G, Fritz MHsi-Yang et al..  2015.  An integrated map of structural variation in 2,504 human genomes.. Nature. 526(7571):75-81.
Goldman SL, MacKay M, Afshinnekoo E, Melnick AM, Wu S, Mason CE.  2019.  The Impact of Heterogeneity on Single-Cell Sequencing.. Front Genet. 10:8.
Afshinnekoo E, Ahsanuddin S, Mason CE.  2016.  Globalizing and crowdsourcing biomedical research.. Br Med Bull. 120(1):27-33.
M Ross E, Mason CE, Finnell RH.  2017.  Genomic approaches to the assessment of human spina bifida risk.. Birth Defects Res. 109(2):120-128.
Rosenfeld JA, Reeves D, Brugler MR, Narechania A, Simon S, Durrett R, Foox J, Shianna K, Schatz MC, Gandara J et al..  2016.  Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius.. Nat Commun. 7:10164.
Zook JM, Catoe D, McDaniel J, Vang L, Spies N, Sidow A, Weng Z, Liu Y, Mason CE, Alexander N et al..  2016.  Extensive sequencing of seven human genomes to characterize benchmark reference materials.. Sci Data. 3:160025.
Goldman SL, Hassan C, Khunte M, Soldatenko A, Jong Y, Afshinnekoo E, Mason CE.  2019.  Epigenetic Modifications in Acute Myeloid Leukemia: Prognosis, Treatment, and Heterogeneity.. Front Genet. 10:133.
Lichinchi G, Gao S, Saletore Y, Gonzalez GMichelle, Bansal V, Wang Y, Mason CE, Rana TM.  2016.  Dynamics of the human and viral m(6)A RNA methylomes during HIV-1 infection of T cells.. Nat Microbiol. 1:16011.
Li S, Garrett-Bakelman FE, Chung SS, Sanders MA, Hricik T, Rapaport F, Patel J, Dillon R, Vijay P, Brown AL et al..  2016.  Distinct evolution and dynamics of epigenetic and genetic heterogeneity in acute myeloid leukemia.. Nat Med. 22(7):792-9.
Backlund PS, Urbanski HF, Doll MA, Hein DW, Bozinoski M, Mason CE, Coon SL, Klein DC.  2017.  Daily Rhythm in Plasma N-acetyltryptamine.. J Biol Rhythms. 32(3):195-211.
McIntyre ABR, Ounit R, Afshinnekoo E, Prill RJ, Hénaff E, Alexander N, Minot SS, Danko D, Foox J, Ahsanuddin S et al..  2019.  Correction to: Comprehensive benchmarking and ensemble approaches for metagenomic classifiers.. Genome Biol. 20(1):72.